Synthetic gene network for entraining and amplifying cellular oscillations.
نویسندگان
چکیده
We present a model for a synthetic gene oscillator and consider the coupling of the oscillator to a periodic process that is intrinsic to the cell. We investigate the synchronization properties of the coupled system, and show how the oscillator can be constructed to yield a significant amplification of cellular oscillations. We reduce the driven oscillator equations to a normal form, and analytically determine the amplification as a function of the strength of the cellular oscillations. The ability to couple naturally occurring genetic oscillations to a synthetically designed network could lead to possible strategies for entraining and/or amplifying oscillations in cellular protein levels.
منابع مشابه
Designer gene networks: Towards fundamental cellular control.
The engineered control of cellular function through the design of synthetic genetic networks is becoming plausible. Here we show how a naturally occurring network can be used as a parts list for artificial network design, and how model formulation leads to computational and analytical approaches relevant to nonlinear dynamics and statistical physics. We first review the relevant work on synthet...
متن کاملGenetic clocks from engineered oscillators
One defining goal of synthetic biology is the development of engineering-based approaches that enable the construction of gene-regulatory networks according to design specs generated from computational modeling. This has resulted in the construction of several fundamental gene circuits, such as toggle switches and oscillators, which have been applied in novel contexts such as triggered biolm de...
متن کاملSYNTHETIC BIOLOGY. Emergent genetic oscillations in a synthetic microbial consortium.
A challenge of synthetic biology is the creation of cooperative microbial systems that exhibit population-level behaviors. Such systems use cellular signaling mechanisms to regulate gene expression across multiple cell types. We describe the construction of a synthetic microbial consortium consisting of two distinct cell types—an "activator" strain and a "repressor" strain. These strains produc...
متن کاملOscillations by Minimal Bacterial Suicide Circuits Reveal Hidden Facets of Host-Circuit Physiology
Synthetic biology seeks to enable programmed control of cellular behavior though engineered biological systems. These systems typically consist of synthetic circuits that function inside, and interact with, complex host cells possessing pre-existing metabolic and regulatory networks. Nevertheless, while designing systems, a simple well-defined interface between the synthetic gene circuit and th...
متن کاملTitle: Long-term enhancement of synchronized oscillations by adrenergic receptor activation in the olfactory bulb. Abbreviated title: Long-term enhancement of olfactory oscillations Authors:
The noradrenergic system is widely thought to be important for associative learning in the olfactory system through actions in the first processing structure, the main olfactory bulb (MOB). Here, we used extracellular local field potential (LFP) and patch-clamp recordings in rat MOB slices to examine NE-induced long-term changes in circuit properties that might underlie learning. During respons...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
- Physical review letters
دوره 88 14 شماره
صفحات -
تاریخ انتشار 2002